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Cluster: Rep_634_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_634_c_13 Rep_634_c_13_25 27555 30896 + 1.B.14.6.13
TC Rep_634_c_13 Rep_634_c_13_26 30909 32519 + 8.A.46.2.2
pfam Rep_634_c_13 Rep_634_c_13_27 32532 33461 + GH18_BT1044-like | GH18_BT1044-like
pfam Rep_634_c_13 Rep_634_c_13_28 33470 34828 + BT_3987-like_N | Laminin_G_3
CAZyme Rep_634_c_13 Rep_634_c_13_29 34849 36441 + GH18
CAZyme Rep_634_c_13 Rep_634_c_13_30 36546 37568 + GH18
CAZyme Rep_634_c_13 Rep_634_c_13_31 37687 38709 + GH18
TC Rep_634_c_13 Rep_634_c_13_32 39134 42376 + 1.B.14.6.2
TC Rep_634_c_13 Rep_634_c_13_33 42380 43933 + 8.A.46.2.1
Gene ID: Rep_634_c_13_25
Type: TC
Location: 27555 - 30896 (+)
Gene ID: Rep_634_c_13_26
Type: TC
Location: 30909 - 32519 (+)
Gene ID: Rep_634_c_13_27
Type: pfam
Location: 32532 - 33461 (+)
Gene ID: Rep_634_c_13_28
Type: pfam
Location: 33470 - 34828 (+)
Gene ID: Rep_634_c_13_29
Type: CAZyme
Location: 34849 - 36441 (+)
Gene ID: Rep_634_c_13_30
Type: CAZyme
Location: 36546 - 37568 (+)
Gene ID: Rep_634_c_13_31
Type: CAZyme
Location: 37687 - 38709 (+)
Gene ID: Rep_634_c_13_32
Type: TC
Location: 39134 - 42376 (+)
Gene ID: Rep_634_c_13_33
Type: TC
Location: 42380 - 43933 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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