Cluster: Rep_631_CGC9
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_631
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_631_c_0 | Rep_631_c_0_579 | 701617 | 702567 | - | 1.A.34.1.3 |
| TC | Rep_631_c_0 | Rep_631_c_0_580 | 702569 | 703591 | - | 1.A.34.1.3 |
| pfam | Rep_631_c_0 | Rep_631_c_0_581 | 703695 | 706316 | + | tRNA-synt_2c | DHHA1 | tRNA_SAD |
| pfam | Rep_631_c_0 | Rep_631_c_0_582 | 706525 | 708051 | + | Phosphodiest | Metalloenzyme | iPGM_N |
| CAZyme | Rep_631_c_0 | Rep_631_c_0_583 | 709357 | 712665 | - | GH2 |
| CAZyme | Rep_631_c_0 | Rep_631_c_0_584 | 712887 | 715235 | - | GH3 |
| CAZyme | Rep_631_c_0 | Rep_631_c_0_585 | 715368 | 717677 | - | CBM32 |
| CAZyme | Rep_631_c_0 | Rep_631_c_0_586 | 717766 | 718650 | - | CBM32 |
| pfam | Rep_631_c_0 | Rep_631_c_0_587 | 718693 | 720495 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_631_c_0 | Rep_631_c_0_588 | 720508 | 723963 | - | 1.B.14.6.1 |
Gene ID: Rep_631_c_0_579
Type: TC
Location: 701617 - 702567 (-)
Type: TC
Location: 701617 - 702567 (-)
Gene ID: Rep_631_c_0_580
Type: TC
Location: 702569 - 703591 (-)
Type: TC
Location: 702569 - 703591 (-)
Gene ID: Rep_631_c_0_581
Type: pfam
Location: 703695 - 706316 (+)
Type: pfam
Location: 703695 - 706316 (+)
Gene ID: Rep_631_c_0_582
Type: pfam
Location: 706525 - 708051 (+)
Type: pfam
Location: 706525 - 708051 (+)
Gene ID: Rep_631_c_0_583
Type: CAZyme
Location: 709357 - 712665 (-)
Type: CAZyme
Location: 709357 - 712665 (-)
Gene ID: Rep_631_c_0_584
Type: CAZyme
Location: 712887 - 715235 (-)
Type: CAZyme
Location: 712887 - 715235 (-)
Gene ID: Rep_631_c_0_585
Type: CAZyme
Location: 715368 - 717677 (-)
Type: CAZyme
Location: 715368 - 717677 (-)
Gene ID: Rep_631_c_0_586
Type: CAZyme
Location: 717766 - 718650 (-)
Type: CAZyme
Location: 717766 - 718650 (-)
Gene ID: Rep_631_c_0_587
Type: pfam
Location: 718693 - 720495 (-)
Type: pfam
Location: 718693 - 720495 (-)
Gene ID: Rep_631_c_0_588
Type: TC
Location: 720508 - 723963 (-)
Type: TC
Location: 720508 - 723963 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes dispar
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.