Cluster: Rep_631_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_631
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_631_c_0 | Rep_631_c_0_401 | 499708 | 502197 | - | GH2 |
| pfam | Rep_631_c_0 | Rep_631_c_0_402 | 502448 | 502939 | + | 4HBT |
| pfam | Rep_631_c_0 | Rep_631_c_0_403 | 503010 | 504104 | + | DUF5128 |
| TC | Rep_631_c_0 | Rep_631_c_0_404 | 504300 | 504737 | - | 3.A.11.1.4 |
| TC | Rep_631_c_0 | Rep_631_c_0_405 | 504795 | 508163 | - | 3.A.5.1.1 |
Gene ID: Rep_631_c_0_401
Type: CAZyme
Location: 499708 - 502197 (-)
Type: CAZyme
Location: 499708 - 502197 (-)
Gene ID: Rep_631_c_0_402
Type: pfam
Location: 502448 - 502939 (+)
Type: pfam
Location: 502448 - 502939 (+)
Gene ID: Rep_631_c_0_403
Type: pfam
Location: 503010 - 504104 (+)
Type: pfam
Location: 503010 - 504104 (+)
Gene ID: Rep_631_c_0_404
Type: TC
Location: 504300 - 504737 (-)
Type: TC
Location: 504300 - 504737 (-)
Gene ID: Rep_631_c_0_405
Type: TC
Location: 504795 - 508163 (-)
Type: TC
Location: 504795 - 508163 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes dispar
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_631_c_0_401 | vegetarian > vegan | 1.06809 | 0.00602 |