dbCAN Logo

Cluster: Rep_631_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_631_c_0 Rep_631_c_0_2224 2751232 2752389 - 9.B.171.1.2
NULL(UNKNOWN) Rep_631_c_0 Rep_631_c_0_2225 2752601 2753281 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_631_c_0 Rep_631_c_0_2226 2753655 2754527 - GH18
NULL(UNKNOWN) Rep_631_c_0 Rep_631_c_0_2227 2755253 2756383 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_631_c_0 Rep_631_c_0_2228 2756422 2758182 + 1.B.9.4.3
pfam Rep_631_c_0 Rep_631_c_0_2229 2758344 2759828 + tRNA-synt_2b | HGTP_anticodon | ProRS-C_1
TC Rep_631_c_0 Rep_631_c_0_2230 2759952 2760851 + 2.A.4.7.9
Gene ID: Rep_631_c_0_2224
Type: TC
Location: 2751232 - 2752389 (-)
Gene ID: Rep_631_c_0_2225
Type:
Location: 2752601 - 2753281 (-)
Gene ID: Rep_631_c_0_2226
Type: CAZyme
Location: 2753655 - 2754527 (-)
Gene ID: Rep_631_c_0_2227
Type:
Location: 2755253 - 2756383 (+)
Gene ID: Rep_631_c_0_2228
Type: TC
Location: 2756422 - 2758182 (+)
Gene ID: Rep_631_c_0_2229
Type: pfam
Location: 2758344 - 2759828 (+)
Gene ID: Rep_631_c_0_2230
Type: TC
Location: 2759952 - 2760851 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Rikenellaceae
→
Genus
Alistipes
→
Species
Alistipes dispar

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_631_c_0_2224 vegan > omnivore 1.06606 0.01510

🧭 Explore Read Mapping of CGC

← Back to Cluster List