Cluster: Rep_631_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_631
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_631_c_0 | Rep_631_c_0_1093 | 1341123 | 1343426 | + | 1.B.14.1.4 |
| TC | Rep_631_c_0 | Rep_631_c_0_1094 | 1343588 | 1345267 | - | 2.A.17.1.6 |
| CAZyme | Rep_631_c_0 | Rep_631_c_0_1095 | 1345347 | 1347383 | + | GH13_8 |
| pfam | Rep_631_c_0 | Rep_631_c_0_1096 | 1347557 | 1348054 | + | DUF4186 |
| pfam | Rep_631_c_0 | Rep_631_c_0_1097 | 1348071 | 1349132 | + | IMS | IMS_C |
| TC | Rep_631_c_0 | Rep_631_c_0_1098 | 1349319 | 1351328 | - | 1.A.13.2.3 |
Gene ID: Rep_631_c_0_1093
Type: TC
Location: 1341123 - 1343426 (+)
Type: TC
Location: 1341123 - 1343426 (+)
Gene ID: Rep_631_c_0_1094
Type: TC
Location: 1343588 - 1345267 (-)
Type: TC
Location: 1343588 - 1345267 (-)
Gene ID: Rep_631_c_0_1095
Type: CAZyme
Location: 1345347 - 1347383 (+)
Type: CAZyme
Location: 1345347 - 1347383 (+)
Gene ID: Rep_631_c_0_1096
Type: pfam
Location: 1347557 - 1348054 (+)
Type: pfam
Location: 1347557 - 1348054 (+)
Gene ID: Rep_631_c_0_1097
Type: pfam
Location: 1348071 - 1349132 (+)
Type: pfam
Location: 1348071 - 1349132 (+)
Gene ID: Rep_631_c_0_1098
Type: TC
Location: 1349319 - 1351328 (-)
Type: TC
Location: 1349319 - 1351328 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes dispar
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.