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Cluster: Rep_616_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_616_c_0 Rep_616_c_0_370 478257 479681 - CE20
pfam Rep_616_c_0 Rep_616_c_0_371 479848 480495 + Sod_Fe_N | Sod_Fe_C
NULL(UNKNOWN) Rep_616_c_0 Rep_616_c_0_372 480672 481031 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_616_c_0 Rep_616_c_0_373 481144 481494 + 3.D.1.8.1
TC Rep_616_c_0 Rep_616_c_0_374 481518 482144 + 3.D.1.3.1
TC Rep_616_c_0 Rep_616_c_0_375 482116 483756 + 3.D.1.5.1
TC Rep_616_c_0 Rep_616_c_0_376 483769 484845 + 3.D.1.5.1
STP Rep_616_c_0 Rep_616_c_0_377 484848 485288 + Fer4 | Fer4
TC Rep_616_c_0 Rep_616_c_0_378 485292 485801 + 3.D.9.1.1
TC Rep_616_c_0 Rep_616_c_0_379 485815 486123 + 3.D.1.2.1
TC Rep_616_c_0 Rep_616_c_0_380 486137 488029 + 3.D.9.1.1
TC Rep_616_c_0 Rep_616_c_0_381 488043 489527 + 3.D.1.2.1
TC Rep_616_c_0 Rep_616_c_0_382 489534 490961 + 3.D.1.2.1
CAZyme Rep_616_c_0 Rep_616_c_0_383 491111 492658 + GT22
pfam Rep_616_c_0 Rep_616_c_0_384 492659 493129 - DNA_binding_1 | Methyltransf_1N
TC Rep_616_c_0 Rep_616_c_0_385 493126 495258 - 8.A.51.1.1
NULL(UNKNOWN) Rep_616_c_0 Rep_616_c_0_386 495414 496100 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_616_c_0 Rep_616_c_0_387 496119 497123 - GH73
pfam Rep_616_c_0 Rep_616_c_0_388 497199 497804 + DUF4254
CAZyme Rep_616_c_0 Rep_616_c_0_389 497788 498813 + GT9
Gene ID: Rep_616_c_0_370
Type: CAZyme
Location: 478257 - 479681 (-)
Gene ID: Rep_616_c_0_371
Type: pfam
Location: 479848 - 480495 (+)
Gene ID: Rep_616_c_0_372
Type:
Location: 480672 - 481031 (+)
Gene ID: Rep_616_c_0_373
Type: TC
Location: 481144 - 481494 (+)
Gene ID: Rep_616_c_0_374
Type: TC
Location: 481518 - 482144 (+)
Gene ID: Rep_616_c_0_375
Type: TC
Location: 482116 - 483756 (+)
Gene ID: Rep_616_c_0_376
Type: TC
Location: 483769 - 484845 (+)
Gene ID: Rep_616_c_0_377
Type: STP
Location: 484848 - 485288 (+)
Gene ID: Rep_616_c_0_378
Type: TC
Location: 485292 - 485801 (+)
Gene ID: Rep_616_c_0_379
Type: TC
Location: 485815 - 486123 (+)
Gene ID: Rep_616_c_0_380
Type: TC
Location: 486137 - 488029 (+)
Gene ID: Rep_616_c_0_381
Type: TC
Location: 488043 - 489527 (+)
Gene ID: Rep_616_c_0_382
Type: TC
Location: 489534 - 490961 (+)
Gene ID: Rep_616_c_0_383
Type: CAZyme
Location: 491111 - 492658 (+)
Gene ID: Rep_616_c_0_384
Type: pfam
Location: 492659 - 493129 (-)
Gene ID: Rep_616_c_0_385
Type: TC
Location: 493126 - 495258 (-)
Gene ID: Rep_616_c_0_386
Type:
Location: 495414 - 496100 (-)
Gene ID: Rep_616_c_0_387
Type: CAZyme
Location: 496119 - 497123 (-)
Gene ID: Rep_616_c_0_388
Type: pfam
Location: 497199 - 497804 (+)
Gene ID: Rep_616_c_0_389
Type: CAZyme
Location: 497788 - 498813 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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