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Cluster: Rep_616_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_616_c_0 Rep_616_c_0_220 284338 285351 + 2.A.6.2.42
TC Rep_616_c_0 Rep_616_c_0_221 285348 288398 + 2.A.6.2.17
pfam Rep_616_c_0 Rep_616_c_0_222 288398 289687 + OEP | OEP
TC Rep_616_c_0 Rep_616_c_0_223 289728 290882 - 9.B.97.1.2
TF Rep_616_c_0 Rep_616_c_0_224 290894 291928 - GntR
CAZyme Rep_616_c_0 Rep_616_c_0_225 292088 293560 + GH39
TC Rep_616_c_0 Rep_616_c_0_226 293645 294907 + 2.A.1.49.10
Gene ID: Rep_616_c_0_220
Type: TC
Location: 284338 - 285351 (+)
Gene ID: Rep_616_c_0_221
Type: TC
Location: 285348 - 288398 (+)
Gene ID: Rep_616_c_0_222
Type: pfam
Location: 288398 - 289687 (+)
Gene ID: Rep_616_c_0_223
Type: TC
Location: 289728 - 290882 (-)
Gene ID: Rep_616_c_0_224
Type: TF
Location: 290894 - 291928 (-)
Gene ID: Rep_616_c_0_225
Type: CAZyme
Location: 292088 - 293560 (+)
Gene ID: Rep_616_c_0_226
Type: TC
Location: 293645 - 294907 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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