Cluster: Rep_616_CGC41
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_616
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_616_c_10 | Rep_616_c_10_44 | 63066 | 64277 | - | 3.B.1.1.5 |
| pfam | Rep_616_c_10 | Rep_616_c_10_45 | 64282 | 64743 | - | Biotin_lipoyl |
| NULL(UNKNOWN) | Rep_616_c_10 | Rep_616_c_10_46 | 64757 | 65092 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_616_c_10 | Rep_616_c_10_47 | 65106 | 66671 | - | 3.B.1.1.2 |
| STP | Rep_616_c_10 | Rep_616_c_10_48 | 66676 | 67086 | - | Glyoxalase |
| NULL(UNKNOWN) | Rep_616_c_10 | Rep_616_c_10_49 | 67601 | 67885 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_616_c_10 | Rep_616_c_10_50 | 67870 | 68859 | - | GT4 |
Gene ID: Rep_616_c_10_44
Type: TC
Location: 63066 - 64277 (-)
Type: TC
Location: 63066 - 64277 (-)
Gene ID: Rep_616_c_10_45
Type: pfam
Location: 64282 - 64743 (-)
Type: pfam
Location: 64282 - 64743 (-)
Gene ID: Rep_616_c_10_46
Type:
Location: 64757 - 65092 (-)
Type:
Location: 64757 - 65092 (-)
Gene ID: Rep_616_c_10_47
Type: TC
Location: 65106 - 66671 (-)
Type: TC
Location: 65106 - 66671 (-)
Gene ID: Rep_616_c_10_48
Type: STP
Location: 66676 - 67086 (-)
Type: STP
Location: 66676 - 67086 (-)
Gene ID: Rep_616_c_10_49
Type:
Location: 67601 - 67885 (+)
Type:
Location: 67601 - 67885 (+)
Gene ID: Rep_616_c_10_50
Type: CAZyme
Location: 67870 - 68859 (-)
Type: CAZyme
Location: 67870 - 68859 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes senegalensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.