dbCAN Logo

Cluster: Rep_616_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_616_c_7 Rep_616_c_7_60 90023 91441 - GH125
TF Rep_616_c_7 Rep_616_c_7_61 91542 92726 - HTH_AraC
CAZyme Rep_616_c_7 Rep_616_c_7_62 92846 95818 + GH92
pfam Rep_616_c_7 Rep_616_c_7_63 95826 96665 + Exo_endo_phos
pfam Rep_616_c_7 Rep_616_c_7_64 96679 98610 + Alk_phosphatase
CAZyme Rep_616_c_7 Rep_616_c_7_65 98617 100233 + GH63
pfam Rep_616_c_7 Rep_616_c_7_66 100230 101261 + Metallophos
sulfatase Rep_616_c_7 Rep_616_c_7_67 101258 102079 + S1_7
CAZyme Rep_616_c_7 Rep_616_c_7_68 102107 103723 + GH20
TC Rep_616_c_7 Rep_616_c_7_69 103979 107167 + 1.B.14.6.1
TC Rep_616_c_7 Rep_616_c_7_70 107180 108814 + 8.A.46.1.3
Gene ID: Rep_616_c_7_60
Type: CAZyme
Location: 90023 - 91441 (-)
Gene ID: Rep_616_c_7_61
Type: TF
Location: 91542 - 92726 (-)
Gene ID: Rep_616_c_7_62
Type: CAZyme
Location: 92846 - 95818 (+)
Gene ID: Rep_616_c_7_63
Type: pfam
Location: 95826 - 96665 (+)
Gene ID: Rep_616_c_7_64
Type: pfam
Location: 96679 - 98610 (+)
Gene ID: Rep_616_c_7_65
Type: CAZyme
Location: 98617 - 100233 (+)
Gene ID: Rep_616_c_7_66
Type: pfam
Location: 100230 - 101261 (+)
Gene ID: Rep_616_c_7_67
Type: sulfatase
Location: 101258 - 102079 (+)
Gene ID: Rep_616_c_7_68
Type: CAZyme
Location: 102107 - 103723 (+)
Gene ID: Rep_616_c_7_69
Type: TC
Location: 103979 - 107167 (+)
Gene ID: Rep_616_c_7_70
Type: TC
Location: 107180 - 108814 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_616_c_7_70 vegan > omnivore 1.02570 0.00566

🧭 Explore Read Mapping of CGC

← Back to Cluster List