dbCAN Logo

Cluster: Rep_616_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_616_c_5 Rep_616_c_5_196 231910 233904 + 3.A.18.1.1
pfam Rep_616_c_5 Rep_616_c_5_197 234088 236280 + DUF349 | DUF349 | DUF349 | DUF349 | DUF349
peptidase Rep_616_c_5 Rep_616_c_5_198 236292 237914 + C26.964
TC Rep_616_c_5 Rep_616_c_5_199 237950 239899 + 2.A.9.3.1
NULL(UNKNOWN) Rep_616_c_5 Rep_616_c_5_200 239999 240853 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_616_c_5 Rep_616_c_5_201 241105 241959 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_616_c_5 Rep_616_c_5_202 242000 242845 - CE1
pfam Rep_616_c_5 Rep_616_c_5_203 242849 244048 - Cons_hypoth95 | MTS | Methyltrans_SAM | PUA_3
pfam Rep_616_c_5 Rep_616_c_5_204 244045 244653 - DNA_pol_A_exo1
TC Rep_616_c_5 Rep_616_c_5_205 244713 246998 - 2.A.16.2.2
Gene ID: Rep_616_c_5_196
Type: TC
Location: 231910 - 233904 (+)
Gene ID: Rep_616_c_5_197
Type: pfam
Location: 234088 - 236280 (+)
Gene ID: Rep_616_c_5_198
Type: peptidase
Location: 236292 - 237914 (+)
Gene ID: Rep_616_c_5_199
Type: TC
Location: 237950 - 239899 (+)
Gene ID: Rep_616_c_5_200
Type:
Location: 239999 - 240853 (+)
Gene ID: Rep_616_c_5_201
Type:
Location: 241105 - 241959 (+)
Gene ID: Rep_616_c_5_202
Type: CAZyme
Location: 242000 - 242845 (-)
Gene ID: Rep_616_c_5_203
Type: pfam
Location: 242849 - 244048 (-)
Gene ID: Rep_616_c_5_204
Type: pfam
Location: 244045 - 244653 (-)
Gene ID: Rep_616_c_5_205
Type: TC
Location: 244713 - 246998 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_616_c_5_201 vegan > omnivore 1.32966 0.02486
Rep_616_c_5_201 vegetarian > omnivore 1.20907 0.04776

🧭 Explore Read Mapping of CGC

← Back to Cluster List