Cluster: Rep_608_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_608
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_608_c_27 | Rep_608_c_27_80 | 82902 | 83159 | + | 1.E.43.1.10 |
| NULL(UNKNOWN) | Rep_608_c_27 | Rep_608_c_27_81 | 83165 | 83518 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_608_c_27 | Rep_608_c_27_82 | 83741 | 84898 | + | GT4 |
| TC | Rep_608_c_27 | Rep_608_c_27_83 | 84957 | 86381 | - | 2.A.1.53.3 |
Gene ID: Rep_608_c_27_80
Type: TC
Location: 82902 - 83159 (+)
Type: TC
Location: 82902 - 83159 (+)
Gene ID: Rep_608_c_27_81
Type:
Location: 83165 - 83518 (+)
Type:
Location: 83165 - 83518 (+)
Gene ID: Rep_608_c_27_82
Type: CAZyme
Location: 83741 - 84898 (+)
Type: CAZyme
Location: 83741 - 84898 (+)
Gene ID: Rep_608_c_27_83
Type: TC
Location: 84957 - 86381 (-)
Type: TC
Location: 84957 - 86381 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.