Cluster: Rep_608_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_608
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_608_c_67 | Rep_608_c_67_9 | 11611 | 12894 | + | GH2 |
| pfam | Rep_608_c_67 | Rep_608_c_67_10 | 13009 | 13482 | + | SPOUT_MTase |
| TF | Rep_608_c_67 | Rep_608_c_67_11 | 13479 | 14063 | + | GerE |
| TC | Rep_608_c_67 | Rep_608_c_67_12 | 14166 | 16394 | + | 1.B.14.8.6 |
Gene ID: Rep_608_c_67_9
Type: CAZyme
Location: 11611 - 12894 (+)
Type: CAZyme
Location: 11611 - 12894 (+)
Gene ID: Rep_608_c_67_10
Type: pfam
Location: 13009 - 13482 (+)
Type: pfam
Location: 13009 - 13482 (+)
Gene ID: Rep_608_c_67_11
Type: TF
Location: 13479 - 14063 (+)
Type: TF
Location: 13479 - 14063 (+)
Gene ID: Rep_608_c_67_12
Type: TC
Location: 14166 - 16394 (+)
Type: TC
Location: 14166 - 16394 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.