Cluster: Rep_607_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_607
- CGC Family ID: CGCFAM_02057
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_607_c_46 | Rep_607_c_46_5 | 6630 | 7937 | + | GH2 |
| pfam | Rep_607_c_46 | Rep_607_c_46_6 | 8038 | 8511 | + | SPOUT_MTase |
| TF | Rep_607_c_46 | Rep_607_c_46_7 | 8513 | 9148 | + | GerE |
| TC | Rep_607_c_46 | Rep_607_c_46_8 | 9338 | 11752 | + | 1.B.14.8.2 |
| NULL(UNKNOWN) | Rep_607_c_46 | Rep_607_c_46_9 | 11779 | 12336 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_607_c_46 | Rep_607_c_46_10 | 12403 | 12831 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_607_c_46 | Rep_607_c_46_11 | 12824 | 14476 | - | 9.B.174.1.1 |
Gene ID: Rep_607_c_46_5
Type: CAZyme
Location: 6630 - 7937 (+)
Type: CAZyme
Location: 6630 - 7937 (+)
Gene ID: Rep_607_c_46_6
Type: pfam
Location: 8038 - 8511 (+)
Type: pfam
Location: 8038 - 8511 (+)
Gene ID: Rep_607_c_46_7
Type: TF
Location: 8513 - 9148 (+)
Type: TF
Location: 8513 - 9148 (+)
Gene ID: Rep_607_c_46_8
Type: TC
Location: 9338 - 11752 (+)
Type: TC
Location: 9338 - 11752 (+)
Gene ID: Rep_607_c_46_9
Type:
Location: 11779 - 12336 (+)
Type:
Location: 11779 - 12336 (+)
Gene ID: Rep_607_c_46_10
Type:
Location: 12403 - 12831 (-)
Type:
Location: 12403 - 12831 (-)
Gene ID: Rep_607_c_46_11
Type: TC
Location: 12824 - 14476 (-)
Type: TC
Location: 12824 - 14476 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.