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Cluster: Rep_607_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_607_c_33 Rep_607_c_33_28 29050 30387 - 9.B.33.1.2
pfam Rep_607_c_33 Rep_607_c_33_29 30398 30922 - Hexapep | Hexapep_2
pfam Rep_607_c_33 Rep_607_c_33_30 30934 31719 - MazG
CAZyme Rep_607_c_33 Rep_607_c_33_31 31796 33964 + GH20
Gene ID: Rep_607_c_33_28
Type: TC
Location: 29050 - 30387 (-)
Gene ID: Rep_607_c_33_29
Type: pfam
Location: 30398 - 30922 (-)
Gene ID: Rep_607_c_33_30
Type: pfam
Location: 30934 - 31719 (-)
Gene ID: Rep_607_c_33_31
Type: CAZyme
Location: 31796 - 33964 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Rikenellaceae
→
Genus
Alistipes
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_607_c_33_30 vegetarian > vegan 1.13886 0.00566

🧭 Explore Read Mapping of CGC

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