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Cluster: Rep_585_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_585_c_13 Rep_585_c_13_13 13992 15140 + GT19
pfam Rep_585_c_13 Rep_585_c_13_14 15143 15961 + DAP_epimerase | DAP_epimerase
pfam Rep_585_c_13 Rep_585_c_13_15 15951 16625 - Ala_racemase_N
TC Rep_585_c_13 Rep_585_c_13_16 16648 18540 - 2.A.9.3.2
pfam Rep_585_c_13 Rep_585_c_13_17 18544 20688 - DUF349 | DUF349 | DUF349 | DUF349 | DUF349
pfam Rep_585_c_13 Rep_585_c_13_18 20781 21458 + tRNA_m1G_MT
TC Rep_585_c_13 Rep_585_c_13_19 21483 22118 + 2.A.76.1.6
TC Rep_585_c_13 Rep_585_c_13_20 22131 24740 - 3.A.3.2.21
Gene ID: Rep_585_c_13_13
Type: CAZyme
Location: 13992 - 15140 (+)
Gene ID: Rep_585_c_13_14
Type: pfam
Location: 15143 - 15961 (+)
Gene ID: Rep_585_c_13_15
Type: pfam
Location: 15951 - 16625 (-)
Gene ID: Rep_585_c_13_16
Type: TC
Location: 16648 - 18540 (-)
Gene ID: Rep_585_c_13_17
Type: pfam
Location: 18544 - 20688 (-)
Gene ID: Rep_585_c_13_18
Type: pfam
Location: 20781 - 21458 (+)
Gene ID: Rep_585_c_13_19
Type: TC
Location: 21483 - 22118 (+)
Gene ID: Rep_585_c_13_20
Type: TC
Location: 22131 - 24740 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
UBA932
→
Genus
Coprenecus
→
Species
Coprenecus sp944326245

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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