Cluster: Rep_585_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_585
- CGC Family ID: CGCFAM_04124
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_585_c_27 | Rep_585_c_27_5 | 4282 | 5058 | - | 3.A.1.27.1 |
| TC | Rep_585_c_27 | Rep_585_c_27_6 | 5055 | 5753 | - | 3.A.1.27.2 |
| CAZyme | Rep_585_c_27 | Rep_585_c_27_7 | 5883 | 7151 | + | GT30 |
| STP | Rep_585_c_27 | Rep_585_c_27_8 | 7251 | 8786 | + | AAA |
| pfam | Rep_585_c_27 | Rep_585_c_27_9 | 8812 | 9225 | + | TsaE |
| TC | Rep_585_c_27 | Rep_585_c_27_10 | 9254 | 10819 | + | 3.D.10.1.4 |
Gene ID: Rep_585_c_27_5
Type: TC
Location: 4282 - 5058 (-)
Type: TC
Location: 4282 - 5058 (-)
Gene ID: Rep_585_c_27_6
Type: TC
Location: 5055 - 5753 (-)
Type: TC
Location: 5055 - 5753 (-)
Gene ID: Rep_585_c_27_7
Type: CAZyme
Location: 5883 - 7151 (+)
Type: CAZyme
Location: 5883 - 7151 (+)
Gene ID: Rep_585_c_27_8
Type: STP
Location: 7251 - 8786 (+)
Type: STP
Location: 7251 - 8786 (+)
Gene ID: Rep_585_c_27_9
Type: pfam
Location: 8812 - 9225 (+)
Type: pfam
Location: 8812 - 9225 (+)
Gene ID: Rep_585_c_27_10
Type: TC
Location: 9254 - 10819 (+)
Type: TC
Location: 9254 - 10819 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Coprenecus
Species
Coprenecus sp944326245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.