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Cluster: Rep_585_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_585_c_18 Rep_585_c_18_7 5106 6521 + GH109
TC Rep_585_c_18 Rep_585_c_18_8 7427 8707 - 3.A.1.122.2
pfam Rep_585_c_18 Rep_585_c_18_9 8727 11414 - MutS_V | MutS_I | MutS_II | MutS_IV | MutS_III
NULL(UNKNOWN) Rep_585_c_18 Rep_585_c_18_10 11512 12528 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_585_c_18 Rep_585_c_18_11 12555 13988 + GT4
NULL(UNKNOWN) Rep_585_c_18 Rep_585_c_18_12 14047 14838 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_585_c_18 Rep_585_c_18_13 14816 15214 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_585_c_18 Rep_585_c_18_14 16951 18288 - 2.A.22.5.3
Gene ID: Rep_585_c_18_7
Type: CAZyme
Location: 5106 - 6521 (+)
Gene ID: Rep_585_c_18_8
Type: TC
Location: 7427 - 8707 (-)
Gene ID: Rep_585_c_18_9
Type: pfam
Location: 8727 - 11414 (-)
Gene ID: Rep_585_c_18_10
Type:
Location: 11512 - 12528 (+)
Gene ID: Rep_585_c_18_11
Type: CAZyme
Location: 12555 - 13988 (+)
Gene ID: Rep_585_c_18_12
Type:
Location: 14047 - 14838 (+)
Gene ID: Rep_585_c_18_13
Type:
Location: 14816 - 15214 (+)
Gene ID: Rep_585_c_18_14
Type: TC
Location: 16951 - 18288 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
UBA932
→
Genus
Coprenecus
→
Species
Coprenecus sp944326245

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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