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Cluster: Rep_583_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_583_c_3 Rep_583_c_3_119 142424 143407 + GT2
TC Rep_583_c_3 Rep_583_c_3_120 144249 145151 + 9.B.18.2.1
pfam Rep_583_c_3 Rep_583_c_3_121 145161 146363 + Epimerase | Polysacc_synt_C
pfam Rep_583_c_3 Rep_583_c_3_122 146370 147524 + Epimerase_2
CAZyme Rep_583_c_3 Rep_583_c_3_123 147554 148720 + GT4
pfam Rep_583_c_3 Rep_583_c_3_124 149000 149881 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | GDP_Man_Dehyd
CAZyme Rep_583_c_3 Rep_583_c_3_125 149993 151207 + GT4
TC Rep_583_c_3 Rep_583_c_3_126 151224 151820 + 9.B.18.1.3
Gene ID: Rep_583_c_3_119
Type: CAZyme
Location: 142424 - 143407 (+)
Gene ID: Rep_583_c_3_120
Type: TC
Location: 144249 - 145151 (+)
Gene ID: Rep_583_c_3_121
Type: pfam
Location: 145161 - 146363 (+)
Gene ID: Rep_583_c_3_122
Type: pfam
Location: 146370 - 147524 (+)
Gene ID: Rep_583_c_3_123
Type: CAZyme
Location: 147554 - 148720 (+)
Gene ID: Rep_583_c_3_124
Type: pfam
Location: 149000 - 149881 (+)
Gene ID: Rep_583_c_3_125
Type: CAZyme
Location: 149993 - 151207 (+)
Gene ID: Rep_583_c_3_126
Type: TC
Location: 151224 - 151820 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
UBA932
→
Genus
Coprenecus
→
Species
Coprenecus sp902388455

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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