Cluster: Rep_583_CGC21
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_583
- CGC Family ID: CGCFAM_04120
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_583_c_14 | Rep_583_c_14_8 | 8519 | 9574 | - | GH29 |
| pfam | Rep_583_c_14 | Rep_583_c_14_9 | 9760 | 10446 | - | PhoU | PhoU |
| TC | Rep_583_c_14 | Rep_583_c_14_10 | 10466 | 11218 | - | 3.A.1.7.1 |
| TC | Rep_583_c_14 | Rep_583_c_14_11 | 11218 | 12105 | - | 3.A.1.7.2 |
| TC | Rep_583_c_14 | Rep_583_c_14_12 | 12112 | 13308 | - | 3.A.1.7.5 |
| STP | Rep_583_c_14 | Rep_583_c_14_13 | 13305 | 14159 | - | SBP_bac_1 |
| CAZyme | Rep_583_c_14 | Rep_583_c_14_14 | 14292 | 16397 | - | GH2 |
| CAZyme | Rep_583_c_14 | Rep_583_c_14_15 | 16435 | 18741 | - | GH92 |
| CAZyme | Rep_583_c_14 | Rep_583_c_14_16 | 18752 | 20959 | - | GH92 |
| CAZyme | Rep_583_c_14 | Rep_583_c_14_17 | 20971 | 23358 | - | GH92 |
| STP | Rep_583_c_14 | Rep_583_c_14_18 | 23425 | 23823 | - | NUDIX |
| CAZyme | Rep_583_c_14 | Rep_583_c_14_19 | 23813 | 24949 | - | GH105 |
Gene ID: Rep_583_c_14_8
Type: CAZyme
Location: 8519 - 9574 (-)
Type: CAZyme
Location: 8519 - 9574 (-)
Gene ID: Rep_583_c_14_9
Type: pfam
Location: 9760 - 10446 (-)
Type: pfam
Location: 9760 - 10446 (-)
Gene ID: Rep_583_c_14_10
Type: TC
Location: 10466 - 11218 (-)
Type: TC
Location: 10466 - 11218 (-)
Gene ID: Rep_583_c_14_11
Type: TC
Location: 11218 - 12105 (-)
Type: TC
Location: 11218 - 12105 (-)
Gene ID: Rep_583_c_14_12
Type: TC
Location: 12112 - 13308 (-)
Type: TC
Location: 12112 - 13308 (-)
Gene ID: Rep_583_c_14_13
Type: STP
Location: 13305 - 14159 (-)
Type: STP
Location: 13305 - 14159 (-)
Gene ID: Rep_583_c_14_14
Type: CAZyme
Location: 14292 - 16397 (-)
Type: CAZyme
Location: 14292 - 16397 (-)
Gene ID: Rep_583_c_14_15
Type: CAZyme
Location: 16435 - 18741 (-)
Type: CAZyme
Location: 16435 - 18741 (-)
Gene ID: Rep_583_c_14_16
Type: CAZyme
Location: 18752 - 20959 (-)
Type: CAZyme
Location: 18752 - 20959 (-)
Gene ID: Rep_583_c_14_17
Type: CAZyme
Location: 20971 - 23358 (-)
Type: CAZyme
Location: 20971 - 23358 (-)
Gene ID: Rep_583_c_14_18
Type: STP
Location: 23425 - 23823 (-)
Type: STP
Location: 23425 - 23823 (-)
Gene ID: Rep_583_c_14_19
Type: CAZyme
Location: 23813 - 24949 (-)
Type: CAZyme
Location: 23813 - 24949 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Coprenecus
Species
Coprenecus sp902388455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.