Cluster: Rep_583_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_583
- CGC Family ID: CGCFAM_01802
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_583_c_8 | Rep_583_c_8_43 | 52811 | 53491 | + | 3.D.1.8.1 |
| STP | Rep_583_c_8 | Rep_583_c_8_44 | 53502 | 54071 | + | Nitroreductase |
| pfam | Rep_583_c_8 | Rep_583_c_8_45 | 54180 | 55478 | - | CarboxypepD_reg | PSII_BNR |
| TC | Rep_583_c_8 | Rep_583_c_8_46 | 55484 | 56794 | - | 2.A.1.10.2 |
| CAZyme | Rep_583_c_8 | Rep_583_c_8_47 | 56801 | 58993 | - | GH20 |
| CAZyme | Rep_583_c_8 | Rep_583_c_8_48 | 59007 | 61505 | - | GH84 |
| CAZyme | Rep_583_c_8 | Rep_583_c_8_49 | 61530 | 65315 | - | GH31_18 |
Gene ID: Rep_583_c_8_43
Type: TC
Location: 52811 - 53491 (+)
Type: TC
Location: 52811 - 53491 (+)
Gene ID: Rep_583_c_8_44
Type: STP
Location: 53502 - 54071 (+)
Type: STP
Location: 53502 - 54071 (+)
Gene ID: Rep_583_c_8_45
Type: pfam
Location: 54180 - 55478 (-)
Type: pfam
Location: 54180 - 55478 (-)
Gene ID: Rep_583_c_8_46
Type: TC
Location: 55484 - 56794 (-)
Type: TC
Location: 55484 - 56794 (-)
Gene ID: Rep_583_c_8_47
Type: CAZyme
Location: 56801 - 58993 (-)
Type: CAZyme
Location: 56801 - 58993 (-)
Gene ID: Rep_583_c_8_48
Type: CAZyme
Location: 59007 - 61505 (-)
Type: CAZyme
Location: 59007 - 61505 (-)
Gene ID: Rep_583_c_8_49
Type: CAZyme
Location: 61530 - 65315 (-)
Type: CAZyme
Location: 61530 - 65315 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Coprenecus
Species
Coprenecus sp902388455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.