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Cluster: Rep_582_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_582_c_4 Rep_582_c_4_24 31123 33072 - GH13_46
CAZyme Rep_582_c_4 Rep_582_c_4_25 33591 34913 - GH13
CAZyme Rep_582_c_4 Rep_582_c_4_26 35171 37306 - GH97
NULL(UNKNOWN) Rep_582_c_4 Rep_582_c_4_27 37327 37971 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_582_c_4 Rep_582_c_4_28 37973 39970 - GH13_36
pfam Rep_582_c_4 Rep_582_c_4_29 40088 41224 - SusE
TC Rep_582_c_4 Rep_582_c_4_30 41253 42872 - 8.A.46.1.1
TC Rep_582_c_4 Rep_582_c_4_31 42891 45854 - 1.B.14.6.1
TC Rep_582_c_4 Rep_582_c_4_32 45908 47224 - 2.A.2.6.3
Gene ID: Rep_582_c_4_24
Type: CAZyme
Location: 31123 - 33072 (-)
Gene ID: Rep_582_c_4_25
Type: CAZyme
Location: 33591 - 34913 (-)
Gene ID: Rep_582_c_4_26
Type: CAZyme
Location: 35171 - 37306 (-)
Gene ID: Rep_582_c_4_27
Type:
Location: 37327 - 37971 (-)
Gene ID: Rep_582_c_4_28
Type: CAZyme
Location: 37973 - 39970 (-)
Gene ID: Rep_582_c_4_29
Type: pfam
Location: 40088 - 41224 (-)
Gene ID: Rep_582_c_4_30
Type: TC
Location: 41253 - 42872 (-)
Gene ID: Rep_582_c_4_31
Type: TC
Location: 42891 - 45854 (-)
Gene ID: Rep_582_c_4_32
Type: TC
Location: 45908 - 47224 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
UBA932
→
Genus
Coprenecus
→
Species
Coprenecus sp900550465

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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