Cluster: Rep_581_CGC3
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_581
- CGC Family ID: CGCFAM_00128
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_581_c_7 | Rep_581_c_7_1 | 131 | 2164 | + | 2.A.37.2.5 |
| CAZyme | Rep_581_c_7 | Rep_581_c_7_2 | 2194 | 3486 | + | GH171 |
| NULL(UNKNOWN) | Rep_581_c_7 | Rep_581_c_7_3 | 3483 | 4595 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_581_c_7 | Rep_581_c_7_4 | 4670 | 6037 | + | BACON | BACON_2 |
| CAZyme | Rep_581_c_7 | Rep_581_c_7_5 | 6378 | 8291 | - | GH13_46 |
| CAZyme | Rep_581_c_7 | Rep_581_c_7_6 | 8340 | 9665 | - | GH13 |
| CAZyme | Rep_581_c_7 | Rep_581_c_7_7 | 9685 | 11820 | - | GH97 |
| NULL(UNKNOWN) | Rep_581_c_7 | Rep_581_c_7_8 | 11836 | 12435 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_581_c_7 | Rep_581_c_7_9 | 12542 | 13681 | - | SusE |
| TC | Rep_581_c_7 | Rep_581_c_7_10 | 13709 | 15295 | - | 8.A.46.1.1 |
| TC | Rep_581_c_7 | Rep_581_c_7_11 | 15350 | 18310 | - | 1.B.14.6.1 |
| TC | Rep_581_c_7 | Rep_581_c_7_12 | 18372 | 19688 | - | 2.A.2.6.3 |
Gene ID: Rep_581_c_7_1
Type: TC
Location: 131 - 2164 (+)
Type: TC
Location: 131 - 2164 (+)
Gene ID: Rep_581_c_7_2
Type: CAZyme
Location: 2194 - 3486 (+)
Type: CAZyme
Location: 2194 - 3486 (+)
Gene ID: Rep_581_c_7_3
Type:
Location: 3483 - 4595 (+)
Type:
Location: 3483 - 4595 (+)
Gene ID: Rep_581_c_7_4
Type: pfam
Location: 4670 - 6037 (+)
Type: pfam
Location: 4670 - 6037 (+)
Gene ID: Rep_581_c_7_5
Type: CAZyme
Location: 6378 - 8291 (-)
Type: CAZyme
Location: 6378 - 8291 (-)
Gene ID: Rep_581_c_7_6
Type: CAZyme
Location: 8340 - 9665 (-)
Type: CAZyme
Location: 8340 - 9665 (-)
Gene ID: Rep_581_c_7_7
Type: CAZyme
Location: 9685 - 11820 (-)
Type: CAZyme
Location: 9685 - 11820 (-)
Gene ID: Rep_581_c_7_8
Type:
Location: 11836 - 12435 (-)
Type:
Location: 11836 - 12435 (-)
Gene ID: Rep_581_c_7_9
Type: pfam
Location: 12542 - 13681 (-)
Type: pfam
Location: 12542 - 13681 (-)
Gene ID: Rep_581_c_7_10
Type: TC
Location: 13709 - 15295 (-)
Type: TC
Location: 13709 - 15295 (-)
Gene ID: Rep_581_c_7_11
Type: TC
Location: 15350 - 18310 (-)
Type: TC
Location: 15350 - 18310 (-)
Gene ID: Rep_581_c_7_12
Type: TC
Location: 18372 - 19688 (-)
Type: TC
Location: 18372 - 19688 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Coprenecus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.