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Cluster: Rep_581_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_581_c_19 Rep_581_c_19_7 7937 9733 + 3.A.1.120.6
NULL(UNKNOWN) Rep_581_c_19 Rep_581_c_19_8 9749 10429 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_581_c_19 Rep_581_c_19_9 10419 11264 - 3.A.1.132.6
TC Rep_581_c_19 Rep_581_c_19_10 11702 12334 - 2.A.76.1.6
pfam Rep_581_c_19 Rep_581_c_19_11 12340 13020 - tRNA_m1G_MT
pfam Rep_581_c_19 Rep_581_c_19_12 13101 15173 + DUF349 | DUF349 | DUF349 | DUF349 | DUF349
TC Rep_581_c_19 Rep_581_c_19_13 15177 17075 + 2.A.9.3.2
pfam Rep_581_c_19 Rep_581_c_19_14 17093 17797 + Ala_racemase_N
pfam Rep_581_c_19 Rep_581_c_19_15 17910 18728 - DAP_epimerase | DAP_epimerase
CAZyme Rep_581_c_19 Rep_581_c_19_16 18738 19886 - GT19
Gene ID: Rep_581_c_19_7
Type: TC
Location: 7937 - 9733 (+)
Gene ID: Rep_581_c_19_8
Type:
Location: 9749 - 10429 (-)
Gene ID: Rep_581_c_19_9
Type: TC
Location: 10419 - 11264 (-)
Gene ID: Rep_581_c_19_10
Type: TC
Location: 11702 - 12334 (-)
Gene ID: Rep_581_c_19_11
Type: pfam
Location: 12340 - 13020 (-)
Gene ID: Rep_581_c_19_12
Type: pfam
Location: 13101 - 15173 (+)
Gene ID: Rep_581_c_19_13
Type: TC
Location: 15177 - 17075 (+)
Gene ID: Rep_581_c_19_14
Type: pfam
Location: 17093 - 17797 (+)
Gene ID: Rep_581_c_19_15
Type: pfam
Location: 17910 - 18728 (-)
Gene ID: Rep_581_c_19_16
Type: CAZyme
Location: 18738 - 19886 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
UBA932
→
Genus
Coprenecus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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