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Cluster: Rep_579_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_579_c_80 Rep_579_c_80_49 57543 59474 - 1.A.33.1.2
pfam Rep_579_c_80 Rep_579_c_80_50 59651 60466 + Pantoate_transf | PEP_mutase
pfam Rep_579_c_80 Rep_579_c_80_51 60447 61181 + PseudoU_synth_2
CAZyme Rep_579_c_80 Rep_579_c_80_52 61150 62244 - GH23
TC Rep_579_c_80 Rep_579_c_80_53 62257 64746 - 1.B.14.15.2
TC Rep_579_c_80 Rep_579_c_80_54 64818 67076 - 9.B.14.3.1
pfam Rep_579_c_80 Rep_579_c_80_55 67066 68697 - DHOR | DHOR
peptidase Rep_579_c_80 Rep_579_c_80_56 68716 69885 - M75.UPW
TC Rep_579_c_80 Rep_579_c_80_57 69930 71267 - 1.B.3.3.1
Gene ID: Rep_579_c_80_49
Type: TC
Location: 57543 - 59474 (-)
Gene ID: Rep_579_c_80_50
Type: pfam
Location: 59651 - 60466 (+)
Gene ID: Rep_579_c_80_51
Type: pfam
Location: 60447 - 61181 (+)
Gene ID: Rep_579_c_80_52
Type: CAZyme
Location: 61150 - 62244 (-)
Gene ID: Rep_579_c_80_53
Type: TC
Location: 62257 - 64746 (-)
Gene ID: Rep_579_c_80_54
Type: TC
Location: 64818 - 67076 (-)
Gene ID: Rep_579_c_80_55
Type: pfam
Location: 67066 - 68697 (-)
Gene ID: Rep_579_c_80_56
Type: peptidase
Location: 68716 - 69885 (-)
Gene ID: Rep_579_c_80_57
Type: TC
Location: 69930 - 71267 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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