Cluster: Rep_579_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_579
- CGC Family ID: CGCFAM_01687
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_579_c_69 | Rep_579_c_69_59 | 60666 | 62492 | + | 3.A.1.106.1 |
| TC | Rep_579_c_69 | Rep_579_c_69_60 | 62527 | 64194 | + | 4.C.1.1.4 |
| pfam | Rep_579_c_69 | Rep_579_c_69_61 | 64213 | 64635 | + | dCMP_cyt_deam_1 | MafB19-deam |
| peptidase | Rep_579_c_69 | Rep_579_c_69_62 | 64641 | 66251 | + | S41.UPA |
| TC | Rep_579_c_69 | Rep_579_c_69_63 | 66586 | 67767 | - | 2.A.1.2.18 |
| CAZyme | Rep_579_c_69 | Rep_579_c_69_64 | 67843 | 71046 | + | GH2 |
Gene ID: Rep_579_c_69_59
Type: TC
Location: 60666 - 62492 (+)
Type: TC
Location: 60666 - 62492 (+)
Gene ID: Rep_579_c_69_60
Type: TC
Location: 62527 - 64194 (+)
Type: TC
Location: 62527 - 64194 (+)
Gene ID: Rep_579_c_69_61
Type: pfam
Location: 64213 - 64635 (+)
Type: pfam
Location: 64213 - 64635 (+)
Gene ID: Rep_579_c_69_62
Type: peptidase
Location: 64641 - 66251 (+)
Type: peptidase
Location: 64641 - 66251 (+)
Gene ID: Rep_579_c_69_63
Type: TC
Location: 66586 - 67767 (-)
Type: TC
Location: 66586 - 67767 (-)
Gene ID: Rep_579_c_69_64
Type: CAZyme
Location: 67843 - 71046 (+)
Type: CAZyme
Location: 67843 - 71046 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Coprenecus
Species
Coprenecus stercorigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.