Cluster: Rep_579_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_579
- CGC Family ID: CGCFAM_04120
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_579_c_56 | Rep_579_c_56_11 | 11884 | 13005 | + | GH105 |
| STP | Rep_579_c_56 | Rep_579_c_56_12 | 13006 | 13416 | + | NUDIX |
| STP | Rep_579_c_56 | Rep_579_c_56_13 | 13519 | 14373 | + | SBP_bac_1 |
| TC | Rep_579_c_56 | Rep_579_c_56_14 | 14370 | 15566 | + | 3.A.1.7.5 |
| TC | Rep_579_c_56 | Rep_579_c_56_15 | 15573 | 16460 | + | 3.A.1.7.3 |
| TC | Rep_579_c_56 | Rep_579_c_56_16 | 16460 | 17212 | + | 3.A.1.7.1 |
Gene ID: Rep_579_c_56_11
Type: CAZyme
Location: 11884 - 13005 (+)
Type: CAZyme
Location: 11884 - 13005 (+)
Gene ID: Rep_579_c_56_12
Type: STP
Location: 13006 - 13416 (+)
Type: STP
Location: 13006 - 13416 (+)
Gene ID: Rep_579_c_56_13
Type: STP
Location: 13519 - 14373 (+)
Type: STP
Location: 13519 - 14373 (+)
Gene ID: Rep_579_c_56_14
Type: TC
Location: 14370 - 15566 (+)
Type: TC
Location: 14370 - 15566 (+)
Gene ID: Rep_579_c_56_15
Type: TC
Location: 15573 - 16460 (+)
Type: TC
Location: 15573 - 16460 (+)
Gene ID: Rep_579_c_56_16
Type: TC
Location: 16460 - 17212 (+)
Type: TC
Location: 16460 - 17212 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Coprenecus
Species
Coprenecus stercorigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.