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Cluster: Rep_579_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_579_c_55 Rep_579_c_55_16 20220 22037 - 8.A.46.1.2
TC Rep_579_c_55 Rep_579_c_55_17 22051 25260 - 1.B.14.6.2
CAZyme Rep_579_c_55 Rep_579_c_55_18 25294 27114 - PL1_2
CAZyme Rep_579_c_55 Rep_579_c_55_19 27128 28375 - GH105
CAZyme Rep_579_c_55 Rep_579_c_55_20 28390 29988 - CE12 | CE8
CAZyme Rep_579_c_55 Rep_579_c_55_21 30125 31573 - GH28
pfam Rep_579_c_55 Rep_579_c_55_22 32752 33960 - OEP | OEP
TC Rep_579_c_55 Rep_579_c_55_23 33974 37096 - 2.A.6.1.5
Gene ID: Rep_579_c_55_16
Type: TC
Location: 20220 - 22037 (-)
Gene ID: Rep_579_c_55_17
Type: TC
Location: 22051 - 25260 (-)
Gene ID: Rep_579_c_55_18
Type: CAZyme
Location: 25294 - 27114 (-)
Gene ID: Rep_579_c_55_19
Type: CAZyme
Location: 27128 - 28375 (-)
Gene ID: Rep_579_c_55_20
Type: CAZyme
Location: 28390 - 29988 (-)
Gene ID: Rep_579_c_55_21
Type: CAZyme
Location: 30125 - 31573 (-)
Gene ID: Rep_579_c_55_22
Type: pfam
Location: 32752 - 33960 (-)
Gene ID: Rep_579_c_55_23
Type: TC
Location: 33974 - 37096 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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