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Cluster: Rep_578_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_578_c_6 Rep_578_c_6_26 31257 32585 + 2.A.2.6.2
TC Rep_578_c_6 Rep_578_c_6_27 32650 35604 + 1.B.14.6.1
TC Rep_578_c_6 Rep_578_c_6_28 35626 37263 + 8.A.46.1.1
pfam Rep_578_c_6 Rep_578_c_6_29 37289 38419 + SusE
CAZyme Rep_578_c_6 Rep_578_c_6_30 38486 40525 + GH13_36
CAZyme Rep_578_c_6 Rep_578_c_6_31 40541 42637 + GH13
CAZyme Rep_578_c_6 Rep_578_c_6_32 42647 43972 + GH13
CAZyme Rep_578_c_6 Rep_578_c_6_33 43991 45961 + GH13_46
NULL(UNKNOWN) Rep_578_c_6 Rep_578_c_6_34 46097 47200 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_578_c_6 Rep_578_c_6_35 47207 48490 - GH171
TC Rep_578_c_6 Rep_578_c_6_36 48494 50533 - 2.A.37.2.5
Gene ID: Rep_578_c_6_26
Type: TC
Location: 31257 - 32585 (+)
Gene ID: Rep_578_c_6_27
Type: TC
Location: 32650 - 35604 (+)
Gene ID: Rep_578_c_6_28
Type: TC
Location: 35626 - 37263 (+)
Gene ID: Rep_578_c_6_29
Type: pfam
Location: 37289 - 38419 (+)
Gene ID: Rep_578_c_6_30
Type: CAZyme
Location: 38486 - 40525 (+)
Gene ID: Rep_578_c_6_31
Type: CAZyme
Location: 40541 - 42637 (+)
Gene ID: Rep_578_c_6_32
Type: CAZyme
Location: 42647 - 43972 (+)
Gene ID: Rep_578_c_6_33
Type: CAZyme
Location: 43991 - 45961 (+)
Gene ID: Rep_578_c_6_34
Type:
Location: 46097 - 47200 (-)
Gene ID: Rep_578_c_6_35
Type: CAZyme
Location: 47207 - 48490 (-)
Gene ID: Rep_578_c_6_36
Type: TC
Location: 48494 - 50533 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
UBA932
→
Genus
Coprenecus
→
Species
Coprenecus pullicola

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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