Cluster: Rep_578_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_578
- CGC Family ID: CGCFAM_04121
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_578_c_2 | Rep_578_c_2_15 | 17693 | 19372 | - | 2.A.17.1.7 |
| TC | Rep_578_c_2 | Rep_578_c_2_16 | 19391 | 20932 | - | 2.A.17.1.6 |
| NULL(UNKNOWN) | Rep_578_c_2 | Rep_578_c_2_17 | 21363 | 22121 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_578_c_2 | Rep_578_c_2_18 | 22105 | 23277 | - | Porin_O_P |
| CAZyme | Rep_578_c_2 | Rep_578_c_2_19 | 23284 | 25116 | - | GH5_7 |
Gene ID: Rep_578_c_2_15
Type: TC
Location: 17693 - 19372 (-)
Type: TC
Location: 17693 - 19372 (-)
Gene ID: Rep_578_c_2_16
Type: TC
Location: 19391 - 20932 (-)
Type: TC
Location: 19391 - 20932 (-)
Gene ID: Rep_578_c_2_17
Type:
Location: 21363 - 22121 (+)
Type:
Location: 21363 - 22121 (+)
Gene ID: Rep_578_c_2_18
Type: pfam
Location: 22105 - 23277 (-)
Type: pfam
Location: 22105 - 23277 (-)
Gene ID: Rep_578_c_2_19
Type: CAZyme
Location: 23284 - 25116 (-)
Type: CAZyme
Location: 23284 - 25116 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Coprenecus
Species
Coprenecus pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.