Cluster: Rep_572_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_572
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_572_c_3 | Rep_572_c_3_33 | 38460 | 39581 | - | 2.A.103.1.3 |
| pfam | Rep_572_c_3 | Rep_572_c_3_34 | 39657 | 40697 | - | LysM | LysM | LysM |
| pfam | Rep_572_c_3 | Rep_572_c_3_35 | 40898 | 42061 | + | DHQ_synthase | DHQS_C |
| TC | Rep_572_c_3 | Rep_572_c_3_36 | 42082 | 44448 | + | 1.I.1.1.3 |
| NULL(UNKNOWN) | Rep_572_c_3 | Rep_572_c_3_37 | 44445 | 45170 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_572_c_3 | Rep_572_c_3_38 | 45167 | 45916 | + | SIR2 |
| CAZyme | Rep_572_c_3 | Rep_572_c_3_39 | 45923 | 47116 | - | GH154 |
Gene ID: Rep_572_c_3_33
Type: TC
Location: 38460 - 39581 (-)
Type: TC
Location: 38460 - 39581 (-)
Gene ID: Rep_572_c_3_34
Type: pfam
Location: 39657 - 40697 (-)
Type: pfam
Location: 39657 - 40697 (-)
Gene ID: Rep_572_c_3_35
Type: pfam
Location: 40898 - 42061 (+)
Type: pfam
Location: 40898 - 42061 (+)
Gene ID: Rep_572_c_3_36
Type: TC
Location: 42082 - 44448 (+)
Type: TC
Location: 42082 - 44448 (+)
Gene ID: Rep_572_c_3_37
Type:
Location: 44445 - 45170 (+)
Type:
Location: 44445 - 45170 (+)
Gene ID: Rep_572_c_3_38
Type: pfam
Location: 45167 - 45916 (+)
Type: pfam
Location: 45167 - 45916 (+)
Gene ID: Rep_572_c_3_39
Type: CAZyme
Location: 45923 - 47116 (-)
Type: CAZyme
Location: 45923 - 47116 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Kiritimatiellia
Order
RFP12
Family
UBA1067
Genus
Spyradenecus
Species
Spyradenecus sp944391055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.