Cluster: Rep_572_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_572
- CGC Family ID: CGCFAM_00126
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_572_c_60 | Rep_572_c_60_16 | 15168 | 16535 | + | 9.B.18.1.2 |
| TC | Rep_572_c_60 | Rep_572_c_60_17 | 16551 | 17321 | + | 3.A.1.103.1 |
| TC | Rep_572_c_60 | Rep_572_c_60_18 | 17331 | 18059 | + | 3.A.1.103.1 |
| pfam | Rep_572_c_60 | Rep_572_c_60_19 | 18079 | 19173 | + | Amino_oxidase | GLF | NAD_binding_8 |
| CAZyme | Rep_572_c_60 | Rep_572_c_60_20 | 19190 | 22180 | + | GT2 | GT2 |
| CAZyme | Rep_572_c_60 | Rep_572_c_60_21 | 22182 | 24119 | + | GT2 |
| CAZyme | Rep_572_c_60 | Rep_572_c_60_22 | 24120 | 25133 | + | GT2 |
Gene ID: Rep_572_c_60_16
Type: TC
Location: 15168 - 16535 (+)
Type: TC
Location: 15168 - 16535 (+)
Gene ID: Rep_572_c_60_17
Type: TC
Location: 16551 - 17321 (+)
Type: TC
Location: 16551 - 17321 (+)
Gene ID: Rep_572_c_60_18
Type: TC
Location: 17331 - 18059 (+)
Type: TC
Location: 17331 - 18059 (+)
Gene ID: Rep_572_c_60_19
Type: pfam
Location: 18079 - 19173 (+)
Type: pfam
Location: 18079 - 19173 (+)
Gene ID: Rep_572_c_60_20
Type: CAZyme
Location: 19190 - 22180 (+)
Type: CAZyme
Location: 19190 - 22180 (+)
Gene ID: Rep_572_c_60_21
Type: CAZyme
Location: 22182 - 24119 (+)
Type: CAZyme
Location: 22182 - 24119 (+)
Gene ID: Rep_572_c_60_22
Type: CAZyme
Location: 24120 - 25133 (+)
Type: CAZyme
Location: 24120 - 25133 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Kiritimatiellia
Order
RFP12
Family
UBA1067
Genus
Spyradenecus
Species
Spyradenecus sp944391055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.