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Cluster: Rep_572_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_572_c_58 Rep_572_c_58_7 10636 11349 + GT2
NULL(UNKNOWN) Rep_572_c_58 Rep_572_c_58_8 11429 12610 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_572_c_58 Rep_572_c_58_9 12798 13802 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_572_c_58 Rep_572_c_58_10 13799 15886 + 2.A.16.2.2
CAZyme Rep_572_c_58 Rep_572_c_58_11 15953 16717 + GT2
CAZyme Rep_572_c_58 Rep_572_c_58_12 16846 18675 + GT8
CAZyme Rep_572_c_58 Rep_572_c_58_13 18675 19697 + GT10
CAZyme Rep_572_c_58 Rep_572_c_58_14 19713 21854 + GT2
Gene ID: Rep_572_c_58_7
Type: CAZyme
Location: 10636 - 11349 (+)
Gene ID: Rep_572_c_58_8
Type:
Location: 11429 - 12610 (+)
Gene ID: Rep_572_c_58_9
Type:
Location: 12798 - 13802 (+)
Gene ID: Rep_572_c_58_10
Type: TC
Location: 13799 - 15886 (+)
Gene ID: Rep_572_c_58_11
Type: CAZyme
Location: 15953 - 16717 (+)
Gene ID: Rep_572_c_58_12
Type: CAZyme
Location: 16846 - 18675 (+)
Gene ID: Rep_572_c_58_13
Type: CAZyme
Location: 18675 - 19697 (+)
Gene ID: Rep_572_c_58_14
Type: CAZyme
Location: 19713 - 21854 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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