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Cluster: Rep_572_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_572_c_33 Rep_572_c_33_5 5051 6184 - GH43_24
CAZyme Rep_572_c_33 Rep_572_c_33_6 6346 7824 + GH29
CAZyme Rep_572_c_33 Rep_572_c_33_7 8182 9276 + GT4
pfam Rep_572_c_33 Rep_572_c_33_8 9269 9796 + Hexapep | Hexapep_2
CAZyme Rep_572_c_33 Rep_572_c_33_9 9805 10725 + GT111
pfam Rep_572_c_33 Rep_572_c_33_10 10879 11358 + 2Fe-2S_thioredx
TC Rep_572_c_33 Rep_572_c_33_11 11373 13232 + 3.D.1.5.1
TC Rep_572_c_33 Rep_572_c_33_12 13243 14997 + 3.D.1.6.3
Gene ID: Rep_572_c_33_5
Type: CAZyme
Location: 5051 - 6184 (-)
Gene ID: Rep_572_c_33_6
Type: CAZyme
Location: 6346 - 7824 (+)
Gene ID: Rep_572_c_33_7
Type: CAZyme
Location: 8182 - 9276 (+)
Gene ID: Rep_572_c_33_8
Type: pfam
Location: 9269 - 9796 (+)
Gene ID: Rep_572_c_33_9
Type: CAZyme
Location: 9805 - 10725 (+)
Gene ID: Rep_572_c_33_10
Type: pfam
Location: 10879 - 11358 (+)
Gene ID: Rep_572_c_33_11
Type: TC
Location: 11373 - 13232 (+)
Gene ID: Rep_572_c_33_12
Type: TC
Location: 13243 - 14997 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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