Cluster: Rep_569_CGC51
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_569
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_569_c_281 | Rep_569_c_281_2 | 1531 | 3996 | - | GH95 |
| TC | Rep_569_c_281 | Rep_569_c_281_3 | 4019 | 5866 | - | 3.A.1.135.5 |
| NULL(UNKNOWN) | Rep_569_c_281 | Rep_569_c_281_4 | 5944 | 6078 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_569_c_281 | Rep_569_c_281_5 | 6587 | 7585 | + | Radical_SAM |
| CAZyme | Rep_569_c_281 | Rep_569_c_281_6 | 7712 | 9502 | + | GH123 |
| pfam | Rep_569_c_281 | Rep_569_c_281_7 | 9681 | 10118 | + | DUF5053 |
| pfam | Rep_569_c_281 | Rep_569_c_281_8 | 10338 | 11468 | + | HEAT | DNA_alkylation |
| CAZyme | Rep_569_c_281 | Rep_569_c_281_9 | 11622 | 13973 | + | GH3 |
Gene ID: Rep_569_c_281_2
Type: CAZyme
Location: 1531 - 3996 (-)
Type: CAZyme
Location: 1531 - 3996 (-)
Gene ID: Rep_569_c_281_3
Type: TC
Location: 4019 - 5866 (-)
Type: TC
Location: 4019 - 5866 (-)
Gene ID: Rep_569_c_281_4
Type:
Location: 5944 - 6078 (+)
Type:
Location: 5944 - 6078 (+)
Gene ID: Rep_569_c_281_5
Type: pfam
Location: 6587 - 7585 (+)
Type: pfam
Location: 6587 - 7585 (+)
Gene ID: Rep_569_c_281_6
Type: CAZyme
Location: 7712 - 9502 (+)
Type: CAZyme
Location: 7712 - 9502 (+)
Gene ID: Rep_569_c_281_7
Type: pfam
Location: 9681 - 10118 (+)
Type: pfam
Location: 9681 - 10118 (+)
Gene ID: Rep_569_c_281_8
Type: pfam
Location: 10338 - 11468 (+)
Type: pfam
Location: 10338 - 11468 (+)
Gene ID: Rep_569_c_281_9
Type: CAZyme
Location: 11622 - 13973 (+)
Type: CAZyme
Location: 11622 - 13973 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.