Cluster: Rep_569_CGC49
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_569
- CGC Family ID: CGCFAM_10950
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_569_c_266 | Rep_569_c_266_8 | 7099 | 8307 | + | 3.D.5.1.1 |
| TC | Rep_569_c_266 | Rep_569_c_266_9 | 8318 | 9127 | + | 3.D.5.1.1 |
| TC | Rep_569_c_266 | Rep_569_c_266_10 | 9135 | 9764 | + | 3.D.5.1.1 |
| TC | Rep_569_c_266 | Rep_569_c_266_11 | 9791 | 10408 | + | 3.D.5.1.1 |
| TC | Rep_569_c_266 | Rep_569_c_266_12 | 10436 | 11722 | + | 3.D.5.1.1 |
| NULL(UNKNOWN) | Rep_569_c_266 | Rep_569_c_266_13 | 11904 | 12098 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_569_c_266 | Rep_569_c_266_14 | 12154 | 13947 | + | GH9 |
Gene ID: Rep_569_c_266_8
Type: TC
Location: 7099 - 8307 (+)
Type: TC
Location: 7099 - 8307 (+)
Gene ID: Rep_569_c_266_9
Type: TC
Location: 8318 - 9127 (+)
Type: TC
Location: 8318 - 9127 (+)
Gene ID: Rep_569_c_266_10
Type: TC
Location: 9135 - 9764 (+)
Type: TC
Location: 9135 - 9764 (+)
Gene ID: Rep_569_c_266_11
Type: TC
Location: 9791 - 10408 (+)
Type: TC
Location: 9791 - 10408 (+)
Gene ID: Rep_569_c_266_12
Type: TC
Location: 10436 - 11722 (+)
Type: TC
Location: 10436 - 11722 (+)
Gene ID: Rep_569_c_266_13
Type:
Location: 11904 - 12098 (+)
Type:
Location: 11904 - 12098 (+)
Gene ID: Rep_569_c_266_14
Type: CAZyme
Location: 12154 - 13947 (+)
Type: CAZyme
Location: 12154 - 13947 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.