Cluster: Rep_569_CGC22
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_569
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_569_c_108 | Rep_569_c_108_21 | 28719 | 31811 | + | 1.B.14.6.1 |
| pfam | Rep_569_c_108 | Rep_569_c_108_22 | 31841 | 33448 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | Rep_569_c_108 | Rep_569_c_108_23 | 33470 | 33901 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_569_c_108 | Rep_569_c_108_24 | 34040 | 35989 | + | 3.A.1.121.4 |
| CAZyme | Rep_569_c_108 | Rep_569_c_108_25 | 36100 | 37266 | + | CE9 |
| CAZyme | Rep_569_c_108 | Rep_569_c_108_26 | 37453 | 38619 | + | CE9 |
| STP | Rep_569_c_108 | Rep_569_c_108_27 | 38711 | 40696 | + | PIG-L |
| NULL(UNKNOWN) | Rep_569_c_108 | Rep_569_c_108_28 | 40745 | 40912 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_569_c_108 | Rep_569_c_108_29 | 41378 | 43339 | + | 9.B.18.2.1 |
| TC | Rep_569_c_108 | Rep_569_c_108_30 | 43364 | 44830 | + | 2.A.66.2.6 |
| CAZyme | Rep_569_c_108 | Rep_569_c_108_31 | 44827 | 45759 | + | GT2 |
| NULL(UNKNOWN) | Rep_569_c_108 | Rep_569_c_108_32 | 45760 | 47004 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_569_c_108 | Rep_569_c_108_33 | 46992 | 48029 | + | Stealth_CR2 | Stealth_CR1 |
| CAZyme | Rep_569_c_108 | Rep_569_c_108_34 | 48026 | 48844 | + | GT2 |
| TC | Rep_569_c_108 | Rep_569_c_108_35 | 48846 | 49454 | + | 9.B.18.1.3 |
Gene ID: Rep_569_c_108_21
Type: TC
Location: 28719 - 31811 (+)
Type: TC
Location: 28719 - 31811 (+)
Gene ID: Rep_569_c_108_22
Type: pfam
Location: 31841 - 33448 (+)
Type: pfam
Location: 31841 - 33448 (+)
Gene ID: Rep_569_c_108_23
Type:
Location: 33470 - 33901 (+)
Type:
Location: 33470 - 33901 (+)
Gene ID: Rep_569_c_108_24
Type: TC
Location: 34040 - 35989 (+)
Type: TC
Location: 34040 - 35989 (+)
Gene ID: Rep_569_c_108_25
Type: CAZyme
Location: 36100 - 37266 (+)
Type: CAZyme
Location: 36100 - 37266 (+)
Gene ID: Rep_569_c_108_26
Type: CAZyme
Location: 37453 - 38619 (+)
Type: CAZyme
Location: 37453 - 38619 (+)
Gene ID: Rep_569_c_108_27
Type: STP
Location: 38711 - 40696 (+)
Type: STP
Location: 38711 - 40696 (+)
Gene ID: Rep_569_c_108_28
Type:
Location: 40745 - 40912 (-)
Type:
Location: 40745 - 40912 (-)
Gene ID: Rep_569_c_108_29
Type: TC
Location: 41378 - 43339 (+)
Type: TC
Location: 41378 - 43339 (+)
Gene ID: Rep_569_c_108_30
Type: TC
Location: 43364 - 44830 (+)
Type: TC
Location: 43364 - 44830 (+)
Gene ID: Rep_569_c_108_31
Type: CAZyme
Location: 44827 - 45759 (+)
Type: CAZyme
Location: 44827 - 45759 (+)
Gene ID: Rep_569_c_108_32
Type:
Location: 45760 - 47004 (+)
Type:
Location: 45760 - 47004 (+)
Gene ID: Rep_569_c_108_33
Type: pfam
Location: 46992 - 48029 (+)
Type: pfam
Location: 46992 - 48029 (+)
Gene ID: Rep_569_c_108_34
Type: CAZyme
Location: 48026 - 48844 (+)
Type: CAZyme
Location: 48026 - 48844 (+)
Gene ID: Rep_569_c_108_35
Type: TC
Location: 48846 - 49454 (+)
Type: TC
Location: 48846 - 49454 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.