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Cluster: Rep_569_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_569_c_59 Rep_569_c_59_3 4766 6667 + 4.C.1.1.14
CAZyme Rep_569_c_59 Rep_569_c_59_4 6914 9514 + GH2
TC Rep_569_c_59 Rep_569_c_59_5 9774 12374 + 1.B.14.6.14
TC Rep_569_c_59 Rep_569_c_59_6 12413 13747 + 2.A.35.1.5
CAZyme Rep_569_c_59 Rep_569_c_59_7 14349 15788 - GH13_5
CAZyme Rep_569_c_59 Rep_569_c_59_8 15894 17639 + GH13_31
pfam Rep_569_c_59 Rep_569_c_59_9 17666 18892 - FAD_binding_2 | DAO | FAD_binding_3 | NAD_binding_8
TC Rep_569_c_59 Rep_569_c_59_10 19051 19302 + 1.E.43.1.10
TC Rep_569_c_59 Rep_569_c_59_11 19555 20907 - 2.A.33.1.1
TC Rep_569_c_59 Rep_569_c_59_12 20987 22186 - 2.A.37.2.6
Gene ID: Rep_569_c_59_3
Type: TC
Location: 4766 - 6667 (+)
Gene ID: Rep_569_c_59_4
Type: CAZyme
Location: 6914 - 9514 (+)
Gene ID: Rep_569_c_59_5
Type: TC
Location: 9774 - 12374 (+)
Gene ID: Rep_569_c_59_6
Type: TC
Location: 12413 - 13747 (+)
Gene ID: Rep_569_c_59_7
Type: CAZyme
Location: 14349 - 15788 (-)
Gene ID: Rep_569_c_59_8
Type: CAZyme
Location: 15894 - 17639 (+)
Gene ID: Rep_569_c_59_9
Type: pfam
Location: 17666 - 18892 (-)
Gene ID: Rep_569_c_59_10
Type: TC
Location: 19051 - 19302 (+)
Gene ID: Rep_569_c_59_11
Type: TC
Location: 19555 - 20907 (-)
Gene ID: Rep_569_c_59_12
Type: TC
Location: 20987 - 22186 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Tannerellaceae
→
Genus
Parabacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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