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Cluster: Rep_566_CGC75

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_566_c_4 Rep_566_c_4_514 565498 568002 - GH2
TC Rep_566_c_4 Rep_566_c_4_515 568089 569402 + 2.A.13.1.3
pfam Rep_566_c_4 Rep_566_c_4_516 569466 570806 - AA_kinase | ACT_9
TC Rep_566_c_4 Rep_566_c_4_517 570836 572566 - 2.A.21.9.1
pfam Rep_566_c_4 Rep_566_c_4_518 572571 573692 - KdpD
pfam Rep_566_c_4 Rep_566_c_4_519 573709 574464 - Gcw_chp
TC Rep_566_c_4 Rep_566_c_4_520 574486 575067 - 3.A.3.7.2
TC Rep_566_c_4 Rep_566_c_4_521 575182 577224 - 3.A.3.7.2
TC Rep_566_c_4 Rep_566_c_4_522 577262 578974 - 3.A.3.7.2
Gene ID: Rep_566_c_4_514
Type: CAZyme
Location: 565498 - 568002 (-)
Gene ID: Rep_566_c_4_515
Type: TC
Location: 568089 - 569402 (+)
Gene ID: Rep_566_c_4_516
Type: pfam
Location: 569466 - 570806 (-)
Gene ID: Rep_566_c_4_517
Type: TC
Location: 570836 - 572566 (-)
Gene ID: Rep_566_c_4_518
Type: pfam
Location: 572571 - 573692 (-)
Gene ID: Rep_566_c_4_519
Type: pfam
Location: 573709 - 574464 (-)
Gene ID: Rep_566_c_4_520
Type: TC
Location: 574486 - 575067 (-)
Gene ID: Rep_566_c_4_521
Type: TC
Location: 575182 - 577224 (-)
Gene ID: Rep_566_c_4_522
Type: TC
Location: 577262 - 578974 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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