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Cluster: Rep_566_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_566_c_1 Rep_566_c_1_550 648183 649778 - GH31_19
CAZyme Rep_566_c_1 Rep_566_c_1_551 649800 651956 - GH89
pfam Rep_566_c_1 Rep_566_c_1_552 651953 652843 - DUF4832
pfam Rep_566_c_1 Rep_566_c_1_553 652951 653523 - DUF4874
CAZyme Rep_566_c_1 Rep_566_c_1_554 653525 654712 - GH16_24
pfam Rep_566_c_1 Rep_566_c_1_555 654796 656268 - SusD_RagB | SusD-like_3
TC Rep_566_c_1 Rep_566_c_1_556 656301 659780 - 1.B.14.6.1
Gene ID: Rep_566_c_1_550
Type: CAZyme
Location: 648183 - 649778 (-)
Gene ID: Rep_566_c_1_551
Type: CAZyme
Location: 649800 - 651956 (-)
Gene ID: Rep_566_c_1_552
Type: pfam
Location: 651953 - 652843 (-)
Gene ID: Rep_566_c_1_553
Type: pfam
Location: 652951 - 653523 (-)
Gene ID: Rep_566_c_1_554
Type: CAZyme
Location: 653525 - 654712 (-)
Gene ID: Rep_566_c_1_555
Type: pfam
Location: 654796 - 656268 (-)
Gene ID: Rep_566_c_1_556
Type: TC
Location: 656301 - 659780 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_566_c_1_553 vegetarian > omnivore 1.03231 0.00110
Rep_566_c_1_553 vegetarian > vegan 1.24327 0.00565

🧭 Explore Read Mapping of CGC

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