dbCAN HGM

Cluster: Rep_566_CGC32

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_566_c_1	Rep_566_c_1_536	626986	628926	+	3.A.3.6.10
CAZyme	Rep_566_c_1	Rep_566_c_1_537	629081	630898	-	GH43
NULL(UNKNOWN)	Rep_566_c_1	Rep_566_c_1_538	630993	631778	+	NULL(UNKNOWN) [View Structural Homologs]
NULL(UNKNOWN)	Rep_566_c_1	Rep_566_c_1_539	631814	631960	+	NULL(UNKNOWN) [View Structural Homologs]
CAZyme	Rep_566_c_1	Rep_566_c_1_540	631968	634847	-	GH2
NULL(UNKNOWN)	Rep_566_c_1	Rep_566_c_1_541	634831	635274	-	NULL(UNKNOWN) [View Structural Homologs]
CAZyme	Rep_566_c_1	Rep_566_c_1_542	635586	637064	-	CE20
CAZyme	Rep_566_c_1	Rep_566_c_1_543	637127	637756	-	GH110
CAZyme	Rep_566_c_1	Rep_566_c_1_544	637753	638835	-	GH110
pfam	Rep_566_c_1	Rep_566_c_1_545	639003	640673	-	SusD_RagB \| SusD-like_3
TC	Rep_566_c_1	Rep_566_c_1_546	640689	644198	-	1.B.14.6.2

Gene ID: Rep_566_c_1_536
Type: TC
Location: 626986 - 628926 (+)

Gene ID: Rep_566_c_1_537
Type: CAZyme
Location: 629081 - 630898 (-)

Gene ID: Rep_566_c_1_538
Type:
Location: 630993 - 631778 (+)

Gene ID: Rep_566_c_1_539
Type:
Location: 631814 - 631960 (+)

Gene ID: Rep_566_c_1_540
Type: CAZyme
Location: 631968 - 634847 (-)

Gene ID: Rep_566_c_1_541
Type:
Location: 634831 - 635274 (-)

Gene ID: Rep_566_c_1_542
Type: CAZyme
Location: 635586 - 637064 (-)

Gene ID: Rep_566_c_1_543
Type: CAZyme
Location: 637127 - 637756 (-)

Gene ID: Rep_566_c_1_544
Type: CAZyme
Location: 637753 - 638835 (-)

Gene ID: Rep_566_c_1_545
Type: pfam
Location: 639003 - 640673 (-)

Gene ID: Rep_566_c_1_546
Type: TC
Location: 640689 - 644198 (-)

Taxonomic Lineage

Domain

→

Phylum

→

Class

→

Order

→

Family

→

Genus

→

Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Gene ID	Condition Pair	log2FC	FDR P-value
Rep_566_c_1_538	vegetarian > omnivore	1.21763	0.00110
Rep_566_c_1_539	vegetarian > omnivore	2.05502	0.00110
Rep_566_c_1_541	vegetarian > omnivore	1.07327	0.00110