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Cluster: Rep_566_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_566_c_1 Rep_566_c_1_520 603564 604367 - 3.A.1.15.6
NULL(UNKNOWN) Rep_566_c_1 Rep_566_c_1_521 604501 604923 - NULL(UNKNOWN)
[View Structural Homologs]
STP Rep_566_c_1 Rep_566_c_1_522 604996 606225 - EPSP_synthase
CAZyme Rep_566_c_1 Rep_566_c_1_523 606325 607443 - GH105
NULL(UNKNOWN) Rep_566_c_1 Rep_566_c_1_524 607454 609196 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_566_c_1 Rep_566_c_1_525 609205 610812 - 8.A.46.1.6
TC Rep_566_c_1 Rep_566_c_1_526 610832 614134 - 1.B.14.6.1
Gene ID: Rep_566_c_1_520
Type: TC
Location: 603564 - 604367 (-)
Gene ID: Rep_566_c_1_521
Type:
Location: 604501 - 604923 (-)
Gene ID: Rep_566_c_1_522
Type: STP
Location: 604996 - 606225 (-)
Gene ID: Rep_566_c_1_523
Type: CAZyme
Location: 606325 - 607443 (-)
Gene ID: Rep_566_c_1_524
Type:
Location: 607454 - 609196 (-)
Gene ID: Rep_566_c_1_525
Type: TC
Location: 609205 - 610812 (-)
Gene ID: Rep_566_c_1_526
Type: TC
Location: 610832 - 614134 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_566_c_1_523 vegan > omnivore 1.13684 0.03363
Rep_566_c_1_523 vegetarian > omnivore 1.19949 0.00110

🧭 Explore Read Mapping of CGC

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