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Cluster: Rep_566_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_566_c_1 Rep_566_c_1_488 554793 558089 + 1.B.14.6.1
TC Rep_566_c_1 Rep_566_c_1_489 558108 559859 + 8.A.46.1.6
pfam Rep_566_c_1 Rep_566_c_1_490 559935 561695 + DUF6057
pfam Rep_566_c_1 Rep_566_c_1_491 561692 563146 + PD40 | PD40
CAZyme Rep_566_c_1 Rep_566_c_1_492 563151 565205 + GH29
TC Rep_566_c_1 Rep_566_c_1_493 565392 566489 + 2.A.6.2.28
TC Rep_566_c_1 Rep_566_c_1_494 566499 569555 + 2.A.6.2.33
Gene ID: Rep_566_c_1_488
Type: TC
Location: 554793 - 558089 (+)
Gene ID: Rep_566_c_1_489
Type: TC
Location: 558108 - 559859 (+)
Gene ID: Rep_566_c_1_490
Type: pfam
Location: 559935 - 561695 (+)
Gene ID: Rep_566_c_1_491
Type: pfam
Location: 561692 - 563146 (+)
Gene ID: Rep_566_c_1_492
Type: CAZyme
Location: 563151 - 565205 (+)
Gene ID: Rep_566_c_1_493
Type: TC
Location: 565392 - 566489 (+)
Gene ID: Rep_566_c_1_494
Type: TC
Location: 566499 - 569555 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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