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Cluster: Rep_566_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_566_c_1 Rep_566_c_1_400 442405 442830 - GH105
CAZyme Rep_566_c_1 Rep_566_c_1_401 442827 444587 - GH105
NULL(UNKNOWN) Rep_566_c_1 Rep_566_c_1_402 444602 444898 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_566_c_1 Rep_566_c_1_403 445022 446260 - GH105
CAZyme Rep_566_c_1 Rep_566_c_1_404 446280 447491 - PL42
pfam Rep_566_c_1 Rep_566_c_1_405 447579 448586 - SusD_RagB
pfam Rep_566_c_1 Rep_566_c_1_406 448610 449485 - SusD-like_3
TC Rep_566_c_1 Rep_566_c_1_407 449503 452952 - 1.B.14.6.1
Gene ID: Rep_566_c_1_400
Type: CAZyme
Location: 442405 - 442830 (-)
Gene ID: Rep_566_c_1_401
Type: CAZyme
Location: 442827 - 444587 (-)
Gene ID: Rep_566_c_1_402
Type:
Location: 444602 - 444898 (-)
Gene ID: Rep_566_c_1_403
Type: CAZyme
Location: 445022 - 446260 (-)
Gene ID: Rep_566_c_1_404
Type: CAZyme
Location: 446280 - 447491 (-)
Gene ID: Rep_566_c_1_405
Type: pfam
Location: 447579 - 448586 (-)
Gene ID: Rep_566_c_1_406
Type: pfam
Location: 448610 - 449485 (-)
Gene ID: Rep_566_c_1_407
Type: TC
Location: 449503 - 452952 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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