dbCAN Logo

Cluster: Rep_566_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_566_c_0 Rep_566_c_0_827 884733 885731 + GH43_34
STP Rep_566_c_0 Rep_566_c_0_828 885853 886500 + TetR_N
pfam Rep_566_c_0 Rep_566_c_0_829 886514 887833 + OEP | OEP
TC Rep_566_c_0 Rep_566_c_0_830 888022 888915 + 3.A.1.105.16
TC Rep_566_c_0 Rep_566_c_0_831 888982 889914 + 3.A.1.105.6
TC Rep_566_c_0 Rep_566_c_0_832 889911 890639 + 3.A.1.105.15
TC Rep_566_c_0 Rep_566_c_0_833 890675 891814 + 3.A.1.105.4
TC Rep_566_c_0 Rep_566_c_0_834 891814 892911 + 3.A.1.105.15
Gene ID: Rep_566_c_0_827
Type: CAZyme
Location: 884733 - 885731 (+)
Gene ID: Rep_566_c_0_828
Type: STP
Location: 885853 - 886500 (+)
Gene ID: Rep_566_c_0_829
Type: pfam
Location: 886514 - 887833 (+)
Gene ID: Rep_566_c_0_830
Type: TC
Location: 888022 - 888915 (+)
Gene ID: Rep_566_c_0_831
Type: TC
Location: 888982 - 889914 (+)
Gene ID: Rep_566_c_0_832
Type: TC
Location: 889911 - 890639 (+)
Gene ID: Rep_566_c_0_833
Type: TC
Location: 890675 - 891814 (+)
Gene ID: Rep_566_c_0_834
Type: TC
Location: 891814 - 892911 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List