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Cluster: Rep_564_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_564_c_1 Rep_564_c_1_147 129560 130312 - 1.B.42.1.2
pfam Rep_564_c_1 Rep_564_c_1_148 130401 131966 - PDDEXK_9 | AAA-ATPase_like
TC Rep_564_c_1 Rep_564_c_1_149 132201 132950 + 3.A.1.27.1
TC Rep_564_c_1 Rep_564_c_1_150 132954 133742 + 3.A.1.27.5
NULL(UNKNOWN) Rep_564_c_1 Rep_564_c_1_151 133843 135951 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_564_c_1 Rep_564_c_1_152 135999 138956 - GH106
TC Rep_564_c_1 Rep_564_c_1_153 139064 140851 - 8.A.46.1.6
TC Rep_564_c_1 Rep_564_c_1_154 140871 144191 - 1.B.14.6.1
Gene ID: Rep_564_c_1_147
Type: TC
Location: 129560 - 130312 (-)
Gene ID: Rep_564_c_1_148
Type: pfam
Location: 130401 - 131966 (-)
Gene ID: Rep_564_c_1_149
Type: TC
Location: 132201 - 132950 (+)
Gene ID: Rep_564_c_1_150
Type: TC
Location: 132954 - 133742 (+)
Gene ID: Rep_564_c_1_151
Type:
Location: 133843 - 135951 (-)
Gene ID: Rep_564_c_1_152
Type: CAZyme
Location: 135999 - 138956 (-)
Gene ID: Rep_564_c_1_153
Type: TC
Location: 139064 - 140851 (-)
Gene ID: Rep_564_c_1_154
Type: TC
Location: 140871 - 144191 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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