Cluster: Rep_564_CGC45
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_564
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_564_c_25 | Rep_564_c_25_14 | 12860 | 14410 | + | CBM50 | GH23 |
| STP | Rep_564_c_25 | Rep_564_c_25_15 | 14534 | 16792 | + | HD |
| pfam | Rep_564_c_25 | Rep_564_c_25_16 | 16799 | 18922 | - | S1 | RNB | OB_Dis3 | CSD2 |
| TC | Rep_564_c_25 | Rep_564_c_25_17 | 19149 | 20102 | - | 2.A.19.5.2 |
| pfam | Rep_564_c_25 | Rep_564_c_25_18 | 20102 | 20497 | - | DUF3127 |
| TF | Rep_564_c_25 | Rep_564_c_25_19 | 20585 | 20941 | - | MerR |
| TC | Rep_564_c_25 | Rep_564_c_25_20 | 20957 | 21940 | - | 1.A.34.1.3 |
Gene ID: Rep_564_c_25_14
Type: CAZyme
Location: 12860 - 14410 (+)
Type: CAZyme
Location: 12860 - 14410 (+)
Gene ID: Rep_564_c_25_15
Type: STP
Location: 14534 - 16792 (+)
Type: STP
Location: 14534 - 16792 (+)
Gene ID: Rep_564_c_25_16
Type: pfam
Location: 16799 - 18922 (-)
Type: pfam
Location: 16799 - 18922 (-)
Gene ID: Rep_564_c_25_17
Type: TC
Location: 19149 - 20102 (-)
Type: TC
Location: 19149 - 20102 (-)
Gene ID: Rep_564_c_25_18
Type: pfam
Location: 20102 - 20497 (-)
Type: pfam
Location: 20102 - 20497 (-)
Gene ID: Rep_564_c_25_19
Type: TF
Location: 20585 - 20941 (-)
Type: TF
Location: 20585 - 20941 (-)
Gene ID: Rep_564_c_25_20
Type: TC
Location: 20957 - 21940 (-)
Type: TC
Location: 20957 - 21940 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp902493135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.