Cluster: Rep_564_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_564
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_564_c_0 | Rep_564_c_0_175 | 202819 | 203637 | + | CE1 |
| pfam | Rep_564_c_0 | Rep_564_c_0_176 | 203677 | 205344 | - | FTHFS |
| pfam | Rep_564_c_0 | Rep_564_c_0_177 | 205426 | 206124 | - | TP_methylase |
| TC | Rep_564_c_0 | Rep_564_c_0_178 | 206500 | 207660 | + | 3.A.1.13.2 |
| TC | Rep_564_c_0 | Rep_564_c_0_179 | 207670 | 208707 | + | 3.A.1.13.2 |
| TC | Rep_564_c_0 | Rep_564_c_0_180 | 208704 | 209714 | + | 3.A.1.13.2 |
Gene ID: Rep_564_c_0_175
Type: CAZyme
Location: 202819 - 203637 (+)
Type: CAZyme
Location: 202819 - 203637 (+)
Gene ID: Rep_564_c_0_176
Type: pfam
Location: 203677 - 205344 (-)
Type: pfam
Location: 203677 - 205344 (-)
Gene ID: Rep_564_c_0_177
Type: pfam
Location: 205426 - 206124 (-)
Type: pfam
Location: 205426 - 206124 (-)
Gene ID: Rep_564_c_0_178
Type: TC
Location: 206500 - 207660 (+)
Type: TC
Location: 206500 - 207660 (+)
Gene ID: Rep_564_c_0_179
Type: TC
Location: 207670 - 208707 (+)
Type: TC
Location: 207670 - 208707 (+)
Gene ID: Rep_564_c_0_180
Type: TC
Location: 208704 - 209714 (+)
Type: TC
Location: 208704 - 209714 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp902493135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.