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Cluster: Rep_564_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_564_c_0 Rep_564_c_0_136 157629 158843 + GT4
CAZyme Rep_564_c_0 Rep_564_c_0_137 158893 159864 + GT2
NULL(UNKNOWN) Rep_564_c_0 Rep_564_c_0_138 159861 161147 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_564_c_0 Rep_564_c_0_139 161149 162012 + Epimerase | Polysacc_synt_2 | RmlD_sub_bind
CAZyme Rep_564_c_0 Rep_564_c_0_140 162019 163179 + GT4
pfam Rep_564_c_0 Rep_564_c_0_141 163189 164022 + HpcH_HpaI
pfam Rep_564_c_0 Rep_564_c_0_142 164379 165248 + 2-Hacid_dh | AlaDh_PNT_C | 2-Hacid_dh_C | NAD_binding_2
TC Rep_564_c_0 Rep_564_c_0_143 165271 165876 + 9.B.18.1.3
TC Rep_564_c_0 Rep_564_c_0_144 166116 167189 + 9.B.18.2.1
Gene ID: Rep_564_c_0_136
Type: CAZyme
Location: 157629 - 158843 (+)
Gene ID: Rep_564_c_0_137
Type: CAZyme
Location: 158893 - 159864 (+)
Gene ID: Rep_564_c_0_138
Type:
Location: 159861 - 161147 (+)
Gene ID: Rep_564_c_0_139
Type: pfam
Location: 161149 - 162012 (+)
Gene ID: Rep_564_c_0_140
Type: CAZyme
Location: 162019 - 163179 (+)
Gene ID: Rep_564_c_0_141
Type: pfam
Location: 163189 - 164022 (+)
Gene ID: Rep_564_c_0_142
Type: pfam
Location: 164379 - 165248 (+)
Gene ID: Rep_564_c_0_143
Type: TC
Location: 165271 - 165876 (+)
Gene ID: Rep_564_c_0_144
Type: TC
Location: 166116 - 167189 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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