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Cluster: Rep_556_CGC96

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_556_c_80 Rep_556_c_80_3 784 1641 + 2.A.64.1.3
STP Rep_556_c_80 Rep_556_c_80_4 1787 2080 + NTP_transf_2
pfam Rep_556_c_80 Rep_556_c_80_5 2073 2441 + HepT-like
CAZyme Rep_556_c_80 Rep_556_c_80_6 2526 4742 + GH92
peptidase Rep_556_c_80 Rep_556_c_80_7 5244 6242 + T02.UPW
CAZyme Rep_556_c_80 Rep_556_c_80_8 6250 7116 - CE1
TC Rep_556_c_80 Rep_556_c_80_9 7264 9525 + 2.A.37.1.5
TC Rep_556_c_80 Rep_556_c_80_10 9591 11189 - 8.A.46.2.2
TC Rep_556_c_80 Rep_556_c_80_11 11207 14647 - 1.B.14.6.13
STP Rep_556_c_80 Rep_556_c_80_12 14948 15913 - FecR
TF Rep_556_c_80 Rep_556_c_80_13 15960 16577 - GerE
CAZyme Rep_556_c_80 Rep_556_c_80_14 16764 19463 + GH3
CAZyme Rep_556_c_80 Rep_556_c_80_15 19469 21781 + GH20
pfam Rep_556_c_80 Rep_556_c_80_16 22022 22849 + DUF5032
CAZyme Rep_556_c_80 Rep_556_c_80_17 23075 24241 + PL38
CAZyme Rep_556_c_80 Rep_556_c_80_18 24290 25546 + GH88
CAZyme Rep_556_c_80 Rep_556_c_80_19 25889 27778 + GH2
Gene ID: Rep_556_c_80_3
Type: TC
Location: 784 - 1641 (+)
Gene ID: Rep_556_c_80_4
Type: STP
Location: 1787 - 2080 (+)
Gene ID: Rep_556_c_80_5
Type: pfam
Location: 2073 - 2441 (+)
Gene ID: Rep_556_c_80_6
Type: CAZyme
Location: 2526 - 4742 (+)
Gene ID: Rep_556_c_80_7
Type: peptidase
Location: 5244 - 6242 (+)
Gene ID: Rep_556_c_80_8
Type: CAZyme
Location: 6250 - 7116 (-)
Gene ID: Rep_556_c_80_9
Type: TC
Location: 7264 - 9525 (+)
Gene ID: Rep_556_c_80_10
Type: TC
Location: 9591 - 11189 (-)
Gene ID: Rep_556_c_80_11
Type: TC
Location: 11207 - 14647 (-)
Gene ID: Rep_556_c_80_12
Type: STP
Location: 14948 - 15913 (-)
Gene ID: Rep_556_c_80_13
Type: TF
Location: 15960 - 16577 (-)
Gene ID: Rep_556_c_80_14
Type: CAZyme
Location: 16764 - 19463 (+)
Gene ID: Rep_556_c_80_15
Type: CAZyme
Location: 19469 - 21781 (+)
Gene ID: Rep_556_c_80_16
Type: pfam
Location: 22022 - 22849 (+)
Gene ID: Rep_556_c_80_17
Type: CAZyme
Location: 23075 - 24241 (+)
Gene ID: Rep_556_c_80_18
Type: CAZyme
Location: 24290 - 25546 (+)
Gene ID: Rep_556_c_80_19
Type: CAZyme
Location: 25889 - 27778 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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