dbCAN HGM

Cluster: Rep_556_CGC72

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_556_c_51	Rep_556_c_51_10	12349	15720	+	1.B.14.6.1
pfam	Rep_556_c_51	Rep_556_c_51_11	15739	17451	+	SusD_RagB \| SusD-like_3
CAZyme	Rep_556_c_51	Rep_556_c_51_12	17511	19661	+	GH31_14
CAZyme	Rep_556_c_51	Rep_556_c_51_13	19827	21794	+	GH97
CAZyme	Rep_556_c_51	Rep_556_c_51_14	21817	24576	+	GH92
CAZyme	Rep_556_c_51	Rep_556_c_51_15	24659	27490	+	CBM51
TC	Rep_556_c_51	Rep_556_c_51_16	28544	31705	+	1.B.14.6.1
pfam	Rep_556_c_51	Rep_556_c_51_17	31725	33266	+	SusD_RagB \| SusD-like_2 \| SusD-like_3
pfam	Rep_556_c_51	Rep_556_c_51_18	33339	34826	+	Arylsulfotrans \| Arylsulfotran_2
TC	Rep_556_c_51	Rep_556_c_51_19	34828	36006	+	2.A.51.1.3

Gene ID: Rep_556_c_51_10
Type: TC
Location: 12349 - 15720 (+)

Gene ID: Rep_556_c_51_11
Type: pfam
Location: 15739 - 17451 (+)

Gene ID: Rep_556_c_51_12
Type: CAZyme
Location: 17511 - 19661 (+)

Gene ID: Rep_556_c_51_13
Type: CAZyme
Location: 19827 - 21794 (+)

Gene ID: Rep_556_c_51_14
Type: CAZyme
Location: 21817 - 24576 (+)

Gene ID: Rep_556_c_51_15
Type: CAZyme
Location: 24659 - 27490 (+)

Gene ID: Rep_556_c_51_16
Type: TC
Location: 28544 - 31705 (+)

Gene ID: Rep_556_c_51_17
Type: pfam
Location: 31725 - 33266 (+)

Gene ID: Rep_556_c_51_18
Type: pfam
Location: 33339 - 34826 (+)

Gene ID: Rep_556_c_51_19
Type: TC
Location: 34828 - 36006 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_556_c_51_18	vegan > omnivore	2.49402	0.01684
Rep_556_c_51_18	vegetarian > omnivore	2.78379	0.00079
Rep_556_c_51_19	vegan > omnivore	2.07101	0.01684
Rep_556_c_51_19	vegetarian > omnivore	2.09178	0.00079

Gene ID	Condition Pair	log2FC	FDR P-value
Rep_556_c_51_14	nonIBD > CD	15.46351	0.00565
Rep_556_c_51_14	nonIBD > UC	2.66477	0.01637